Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920493.1_cds_XP_016469604.1_62136
CDS Infomation

[gene=LOC107791956] [db_xref=GeneID:107791956] [protein=CDPK-related kinase 5-like isoform X2] [protein_id=XP_016469604.1] [location=complement(join(31636..31776,31910..32077,32167..32229,32321..32428,38973..39085,39163..39459,39564..39642,39748..39856,40280..40410,42143..42664))] [gbkey=CDS]
Sequence

ATGGGTGCTTGTACCTCAAAGCCTCCGAATAAACCCAATCCTTATTCCCCAAAAGACTCC
CTCGAAATCCTTCCACCACCGGAAACTCCAAACCCACAGAAGGACAACAATGAAGTAAAA
AAGTCACCTTTTTTCCCTTTTTACTCACCTAGTCCCGCTCGTTATTTTCTATCCAAGAAA
TCTCCTGCCCGTCAGTCTTCTGGTTCTAAAAGTGGTAATTCTACTCCGGCGAGGTTATTT
AAGCGGCCTTTTCCTCCTCCTTCTCCGGCAAAACACATAAAGGCTTTGCTTTTGAGGCGG
CACGGTAGTGTAAAGCCTAATGCTGCTGCTATTCCTGAAGGAGAGGAAACTGAGGGTGCT
AACTTGGATAAGAATTTTGGTTTTTCTAAGCAGTTTAAGAATAAGTATGAGGTTGGGGAT
GAAGTGGGTAGAGGCCATTTTGGGTATACTTGTTCTGCTATTGCTAAGAAAGGTGAACTT
AAGGGTCAACAAGTTGCTGTAAAGGTCATTCCAAAAGCCAAGATGACAACAGCTATTTCC
ATCGAGGATGTTAGAAGGGAAGTTAAAATTTTGCGCGCCTTAACAGGACATAACAATCTG
ATACAATTCTATGATGCATTTGAAGATCAGGATAATGTCTATGTAGTGATGGACGGCGGG
AAGTACTCAGAAGAGGATGCAAAGGCCGTTATGGTACAGATATTGAATGTTGTTGCATTC
TGTCATCTCCAGGGTGTTGTGCACCGTGATCTTAAACCTGAGAATTTTTTGTTTTCGTCG
AAGGATGAATCTTCGCAGTTAAAAGCTATAGATTTTGGCTTATCAGATTTTGTGAGACCA
GATGAAAAGCTTAATGACATTGTTGGAAGTGCATATTACGTAGCACCAGAAGTTCTTCAC
AGATCATATGGTACAGAGGCTGATGTGTGGAGTATAGGTGTGATAGCATATATTCTTCTG
TGTGGTAGTCGTCCATTTTGGGCTCGCACAGAGTCTGGAATCTTCAGGGCTGTTTTAAAG
GCTGATCCAACTTATGATGAAGCACCTTGGCCTACACTAACTTCGGAGGCTAAAGATTTT
GTCAAGCGACTATTGAATAAAGATCCTAGGAAAAGAATGAGTGCTGCTCAAGCATTATGT
CATCCTTGGATGCGGAATCACAGTGGTGCAAAACTACCACTTGATGTTCTTATATTTCGA
CTCATGAAAGCATATATGCGATCATCCTCTTTGCGTAAGGCTGCTTTAAGGGCAATGTCG
AAAACTTTGACAGCAGATGAACTGTTCTACCTGAAGGAGCAATTTGCATTGCTGGAGCCA
GACAAAAATGGCAGCATAAAACTAGAAAATATAAGATCAGCGCTGATGAAATATGGAACA
GATGCTATGAAGGAGTCGCGCATTCCGGATTTTCTTGCCTCGCTAAATGCACTTCAATAT
AGAAAGATGGATTTTGAAGAATTCTGCGCAGCTGCCTCAAGTGTTCATCAGTTGGAGGCA
CTTGAGCGCTGGGAACAACATGCTAGGTGTGCATATGAAGTTTTTGAGAAGGATGGCAAT
AGGGCTATTATGATAGAAGAACTTGCATCTGAACTTGGACTGGGTCCTTCAGTACCAGTT
CATGCCGTTCTACATGACTGGATAAGGCATACAGATGGAAAGCTAAGTTTTCTTGGATTT
GTGAAATTGTTGCATGGTCCCTCCACTCGAGGACTTGCAAAGGCACAGTAA

Peptide Sequence

PEP ID

XP_016469604.1
PEP Infomation

PREDICTED: CDPK-related kinase 5-like isoform X2 [Nicotiana tabacum]
Sequence

MGACTSKPPNKPNPYSPKDSLEILPPPETPNPQKDNNEVKKSPFFPFYSPSPARYFLSKK
SPARQSSGSKSGNSTPARLFKRPFPPPSPAKHIKALLLRRHGSVKPNAAAIPEGEETEGA
NLDKNFGFSKQFKNKYEVGDEVGRGHFGYTCSAIAKKGELKGQQVAVKVIPKAKMTTAIS
IEDVRREVKILRALTGHNNLIQFYDAFEDQDNVYVVMDGGKYSEEDAKAVMVQILNVVAF
CHLQGVVHRDLKPENFLFSSKDESSQLKAIDFGLSDFVRPDEKLNDIVGSAYYVAPEVLH
RSYGTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPTYDEAPWPTLTSEAKDF
VKRLLNKDPRKRMSAAQALCHPWMRNHSGAKLPLDVLIFRLMKAYMRSSSLRKAALRAMS
KTLTADELFYLKEQFALLEPDKNGSIKLENIRSALMKYGTDAMKESRIPDFLASLNALQY
RKMDFEEFCAAASSVHQLEALERWEQHARCAYEVFEKDGNRAIMIEELASELGLGPSVPV
HAVLHDWIRHTDGKLSFLGFVKLLHGPSTRGLAKAQ

Transcript Sequence

Gene sequence data has not been registered.